Best TWAS P=4.87e-08 · Best GWAS P=3.66e-07 conditioned to 0.0744
# | Study | Tissue | Gene | h2 | eQTL R2 | model | # weights | model R2 | model R2 P | eQTL GWAS Z | TWAS Z | TWAS P | Top SNP corr | PP3 | PP4 | joint |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
1 | The Cancer Genome Atlas | Brain Lower Grade Glioma | STK16 | 0.05 | 0.00 | enet | 10 | 0.03 | 0.00053 | 3.9 | -5.2 | 1.6e-07 | -0.77 | 0 | 0.22 | FALSE |
2 | The Cancer Genome Atlas | Pancreatic Adenocarcinoma | GLB1L | 0.19 | 0.06 | enet | 14 | 0.09 | 0.00020 | 4.6 | -5.5 | 4.9e-08 | -0.70 | 0 | 0.32 | TRUE |