Best TWAS P=8.72e-09 · Best GWAS P=7.84e-09 conditioned to 1
# | Study | Tissue | Gene | h2 | eQTL R2 | model | # weights | model R2 | model R2 P | eQTL GWAS Z | TWAS Z | TWAS P | Top SNP corr | PP3 | PP4 | joint |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
1 | GTEx | Artery Aorta | USP15 | 0.36 | 0.38 | lasso | 3 | 0.39 | 1.2e-22 | -5.8 | -5.8 | 8.7e-09 | 0.99 | 0.01 | 0.99 | TRUE |
2 | YFS | Blood | USP15 | 0.07 | 0.03 | enet | 42 | 0.04 | 3.8e-12 | 3.3 | 5.2 | 2.3e-07 | -0.58 | 0.95 | 0.04 | FALSE |