Best TWAS P=1.01e-08 · Best GWAS P=1.12e-08 conditioned to 6.9e-06
| # | Study | Tissue | Gene | h2 | eQTL R2 | model | # weights | model R2 | model R2 P | eQTL GWAS Z | TWAS Z | TWAS P | Top SNP corr | PP3 | PP4 | joint |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | NTR | Blood | LAPTM5 | 0.06 | 0.04 | bslmm | 540 | 0.04 | 2.7e-12 | 2.2 | 5.7 | 1e-08 | -0.23 | 0.98 | 0 | TRUE |
| 2 | YFS | Blood | LAPTM5 | 0.09 | 0.04 | lasso | 5 | 0.09 | 1.9e-26 | 2.2 | 5.1 | 3e-07 | -0.07 | 0.98 | 0 | FALSE |