[Hub]/) : Traits : Blood Eosinophil Count : ← →

chr3:195,734,915-197,161,849

Best TWAS P=1.46e-15 · Best GWAS P=4.06e-21 conditioned to NaN

Associated models

#	Study	Tissue	Gene	h2	eQTL R2	model	# weights	model R2	model R2 P	eQTL GWAS Z	TWAS Z	TWAS P	Top SNP corr	PP3	PP4	joint
1	CommonMind	Brain Pre-frontal Cortex	CEP19	0.18	0.10	lasso	6	0.12	1.3e-14	-5.6	6.5	1.0e-10	-0.05	1.00	0.00	FALSE
2	GTEx	Adipose Visceral Omentum	PIGX	0.25	0.08	lasso	4	0.08	7.5e-05	-5.2	5.8	8.9e-09	-0.09	0.84	0.01	TRUE
3	GTEx	Adipose Visceral Omentum	CEP19	0.27	0.15	lasso	4	0.15	5.3e-08	-5.6	5.7	1.1e-08	-0.08	1.00	0.00	FALSE
4	GTEx	Adrenal Gland	PIGX	0.24	0.01	lasso	6	0.04	1.1e-02	-5.0	6.0	2.3e-09	-0.07	0.44	0.09	TRUE
5	GTEx	Adrenal Gland	CEP19	0.24	0.17	lasso	3	0.15	4.8e-06	-5.6	5.7	1.5e-08	-0.08	0.69	0.07	FALSE
6	GTEx	Artery Coronary	CEP19	0.33	0.15	lasso	3	0.14	2.0e-05	-5.2	5.3	1.3e-07	-0.08	0.53	0.02	FALSE
7	GTEx	Artery Tibial	CEP19	0.11	0.07	lasso	3	0.07	5.3e-06	-5.6	5.6	1.7e-08	-0.08	0.89	0.00	FALSE
8	GTEx	Brain Caudate basal ganglia	CEP19	0.31	0.18	lasso	5	0.18	8.0e-06	-5.5	5.9	4.9e-09	-0.08	0.58	0.05	FALSE
9	GTEx	Cells EBV-transformed lymphocytes	CEP19	0.30	0.12	lasso	4	0.13	4.2e-05	-5.0	5.1	3.1e-07	-0.09	0.58	0.02	FALSE
10	GTEx	Esophagus Muscularis	PIGX	0.12	0.01	lasso	5	0.02	3.7e-02	-5.1	5.3	1.4e-07	-0.11	0.31	0.03	TRUE
11	GTEx	Esophagus Muscularis	CEP19	0.16	0.11	lasso	4	0.07	3.4e-05	-5.5	5.5	3.8e-08	-0.07	0.97	0.00	FALSE
12	GTEx	Heart Atrial Appendage	CEP19	0.19	0.08	lasso	6	0.07	5.9e-04	-5.9	5.6	2.0e-08	-0.11	0.68	0.05	FALSE
13	GTEx	Lung	PIGX	0.21	0.08	enet	7	0.08	1.8e-06	-5.5	5.6	2.3e-08	-0.09	0.98	0.00	FALSE
14	GTEx	Skin Not Sun Exposed Suprapubic	PIGX	0.17	0.11	lasso	3	0.13	1.7e-07	-5.1	5.5	3.0e-08	-0.11	0.99	0.00	FALSE
15	GTEx	Skin Sun Exposed Lower leg	NRROS	0.07	0.02	enet	14	0.03	9.6e-04	-5.5	-8.0	1.5e-15	0.53	0.02	0.86	TRUE
16	GTEx	Spleen	CEP19	0.51	0.20	lasso	6	0.17	3.2e-05	-5.2	5.1	2.8e-07	-0.11	0.59	0.07	FALSE
17	GTEx	Stomach	PIGX	0.22	0.18	lasso	2	0.16	3.7e-08	-5.2	5.2	1.8e-07	-0.07	0.98	0.00	FALSE
18	GTEx	Testis	CEP19	0.58	0.50	lasso	2	0.50	5.6e-25	-5.9	5.8	6.5e-09	-0.08	1.00	0.00	TRUE
19	GTEx	Thyroid	PIGX	0.12	0.05	lasso	3	0.04	2.3e-04	-5.5	5.2	1.6e-07	-0.09	0.85	0.01	FALSE
20	GTEx	Thyroid	CEP19	0.24	0.15	enet	24	0.19	1.4e-14	-5.5	5.5	3.3e-08	-0.07	1.00	0.00	TRUE
21	GTEx	Whole Blood	CEP19	0.10	0.09	lasso	3	0.09	8.0e-09	-5.9	5.3	1.0e-07	-0.09	1.00	0.00	FALSE
22	YFS	Blood	PIGX	0.07	0.04	bslmm	441	0.04	4.0e-14	-5.0	6.3	3.3e-10	-0.09	1.00	0.00	TRUE
23	The Cancer Genome Atlas	Breast Invasive Carcinoma	C3orf34	0.03	0.00	blup	60	0.02	6.8e-06	-5.6	6.8	1.0e-11	-0.07	0.02	0.95	TRUE
24	The Cancer Genome Atlas	Head and Neck Squamous Cell Carcinoma	C3orf34	0.08	0.14	lasso	5	0.15	2.3e-16	-5.2	5.3	1.2e-07	-0.08	0.05	0.95	FALSE
25	The Cancer Genome Atlas	Kidney Renal Clear Cell Carcinoma	C3orf34	0.05	0.07	lasso	1	0.06	1.1e-07	-5.9	5.9	3.7e-09	-0.09	0.00	1.00	FALSE
26	The Cancer Genome Atlas	Kidney Renal Papillary Cell Carcinoma	C3orf34	0.06	0.05	lasso	2	0.02	2.8e-02	-5.6	5.6	2.3e-08	-0.08	0.02	0.88	FALSE
27	The Cancer Genome Atlas	Brain Lower Grade Glioma	C3orf34	0.07	0.09	lasso	2	0.09	1.2e-10	-5.1	5.4	7.0e-08	-0.11	0.05	0.95	FALSE
28	The Cancer Genome Atlas	Prostate Adenocarcinoma	C3orf34	0.05	0.06	enet	10	0.05	2.8e-06	-5.9	6.7	2.5e-11	-0.05	0.00	0.99	FALSE
29	The Cancer Genome Atlas	Prostate Adenocarcinoma	PAK2	0.03	0.00	blup	83	0.01	1.4e-02	6.8	-5.4	6.1e-08	0.09	0.05	0.36	TRUE
30	The Cancer Genome Atlas	Testicular Germ Cell Tumors	C3orf34	0.20	0.21	lasso	5	0.23	1.5e-08	-5.5	5.8	7.2e-09	-0.08	0.02	0.97	FALSE
31	The Cancer Genome Atlas	Testicular Germ Cell Tumors	PIGX	0.09	0.06	lasso	4	0.05	5.7e-03	4.7	5.7	9.6e-09	-0.09	0.06	0.05	TRUE
32	The Cancer Genome Atlas	Thyroid Carcinoma	C3orf34	0.11	0.11	blup	59	0.12	1.4e-11	-5.0	5.5	3.4e-08	-0.05	0.05	0.95	FALSE
33	The Cancer Genome Atlas	Thyroid Carcinoma	LRRC33	0.09	0.03	enet	12	0.06	6.4e-07	4.2	-6.0	2.0e-09	0.10	0.73	0.02	FALSE