Best TWAS P=3.85e-08 · Best GWAS P=3.51e-08 conditioned to 1
| # | Study | Tissue | Gene | h2 | eQTL R2 | model | # weights | model R2 | model R2 P | eQTL GWAS Z | TWAS Z | TWAS P | Top SNP corr | PP3 | PP4 | joint |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | The Cancer Genome Atlas | Bladder Urothelial Carcinoma | STX6 | 0.06 | 0.03 | enet | 8 | 0.03 | 2.8e-03 | 5.3 | 5.3 | 1.3e-07 | 0.87 | 0.00 | 0.90 | FALSE |
| 2 | The Cancer Genome Atlas | Liver Hepatocellular Carcinoma | STX6 | 0.10 | 0.01 | blup | 87 | 0.01 | 1.1e-01 | 5.3 | 5.4 | 6.6e-08 | 0.78 | 0.01 | 0.82 | FALSE |
| 3 | The Cancer Genome Atlas | Thyroid Carcinoma | STX6 | 0.05 | 0.04 | enet | 3 | 0.04 | 9.8e-05 | 5.5 | 5.5 | 3.9e-08 | 1.00 | 0.00 | 0.99 | TRUE |