TWAS
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Models
Genes
Traits
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Traits
:
Lung FEV1/FVC ratio
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chr1:160,851,894-162,347,618
Best TWAS P=8.25e-09 · Best GWAS P=2.41e-06 conditioned to 3.34e-05
160.8M
161M
161.2M
161.4M
161.6M
161.8M
162M
162.2M
162.4M
0
1
2
3
4
5
6
physical position
-log10 P
Marginal
▼
Associated models
#
Study
Tissue
Gene
h2
eQTL R2
model
# weights
model R2
model R2 P
eQTL GWAS Z
TWAS Z
TWAS P
Top SNP corr
PP3
PP4
joint
4
YFS
Blood
FCGR2B
0.54
0.21
enet
101
0.38
9.1e-133
-4.4
-5.8
8.2e-09
0.10
0.02
0.92
TRUE
3
NTR
Blood
FCGR2B
0.25
0.06
enet
88
0.18
7.9e-57
-2.7
-5.3
1.1e-07
0.17
0.13
0.51
FALSE
1
GTEx
Artery Tibial
FCGR2C
0.17
0.03
enet
30
0.06
2.5e-05
-4.4
5.2
1.9e-07
-0.22
0.02
0.89
FALSE
2
GTEx
Whole Blood
FCGR2B
0.26
0.10
enet
35
0.14
9.4e-13
-4.4
-5.1
3.0e-07
0.13
0.02
0.92
FALSE