TWAS
hub
About
Usage
Models
Genes
Traits
[Hub]/) :
Traits
:
Lung FEV1/FVC ratio
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chr17:60,013,554-61,464,730
Best TWAS P=2.84e-19 · Best GWAS P=2.92e-18 conditioned to 0.000231
60M
60.2M
60.4M
60.6M
60.8M
61M
61.2M
61.4M
0
5
10
15
physical position
-log10 P
Marginal
▼
Associated models
#
Study
Tissue
Gene
h2
eQTL R2
model
# weights
model R2
model R2 P
eQTL GWAS Z
TWAS Z
TWAS P
Top SNP corr
PP3
PP4
joint
1
GTEx
Cells Transformed fibroblasts
MRC2
0.10
0.02
enet
17
0.02
1.5e-02
6.6
-9.0
2.8e-19
0.66
0.01
0.94
TRUE
2
GTEx
Lung
MRC2
0.13
0.01
enet
12
0.06
1.6e-05
7.7
-7.9
3.7e-15
0.28
0.23
0.21
FALSE
3
The Cancer Genome Atlas
Esophageal Carcinoma
METTL2A
0.14
0.03
blup
16
0.04
2.4e-02
-3.1
-6.2
4.7e-10
0.06
0.00
0.40
FALSE