TWAS
hub
About
Usage
Models
Genes
Traits
[Hub]/) :
Traits
:
Lung FEV1/FVC ratio
:
←
→
chr22:37,835,576-38,415,721
Best TWAS P=4.01e-08 · Best GWAS P=9.53e-07 conditioned to 0.922
37.9M
38M
38.1M
38.2M
38.3M
38.4M
0
1
2
3
4
5
6
physical position
-log10 P
Conditional
▼
Associated models
#
Study
Tissue
Gene
h2
eQTL R2
model
# weights
model R2
model R2 P
eQTL GWAS Z
TWAS Z
TWAS P
Top SNP corr
PP3
PP4
joint
1
The Cancer Genome Atlas
Kidney Renal Clear Cell Carcinoma
TRIOBP
0.11
0.09
enet
10
0.11
5.5e-12
4.9
-5.5
4.0e-08
-0.88
0.00
0.99
TRUE
2
The Cancer Genome Atlas
Prostate Adenocarcinoma
TRIOBP
0.07
0.04
blup
67
0.03
2.1e-04
4.7
-5.3
9.2e-08
-0.92
0.01
0.96
FALSE