TWAS
hub
About
Usage
Models
Genes
Traits
[Hub]/) :
Traits
:
Lung FEV1/FVC ratio
:
←
→
chr6:202,452-1,392,108
Best TWAS P=1.83e-09 · Best GWAS P=5.04e-09 conditioned to 0.00142
0.2M
0.4M
0.6M
0.8M
1M
1.2M
1.4M
0
2
4
6
8
physical position
-log10 P
Marginal
▼
Associated models
#
Study
Tissue
Gene
h2
eQTL R2
model
# weights
model R2
model R2 P
eQTL GWAS Z
TWAS Z
TWAS P
Top SNP corr
PP3
PP4
joint
4
The Cancer Genome Atlas
Kidney Renal Clear Cell Carcinoma
EXOC2
0.18
0.03
blup
203
0.10
1.4e-11
-5.1
-6.0
1.8e-09
0.52
0.30
0.67
TRUE
3
METSIM
Adipose
EXOC2
0.10
0.04
lasso
11
0.06
9.8e-10
-5.1
-5.5
3.1e-08
0.54
0.23
0.77
FALSE
2
GTEx
Cells Transformed fibroblasts
EXOC2
0.23
0.16
lasso
4
0.16
4.0e-12
-5.1
-5.3
1.4e-07
0.48
0.18
0.82
FALSE
1
GTEx
Artery Aorta
EXOC2
0.33
0.10
lasso
10
0.09
1.3e-05
-5.1
-5.2
1.7e-07
0.42
0.25
0.71
FALSE