Best TWAS P=8.56e-08 · Best GWAS P=3.45e-07 conditioned to 8.49e-06
| # | Study | Tissue | Gene | h2 | eQTL R2 | model | # weights | model R2 | model R2 P | eQTL GWAS Z | TWAS Z | TWAS P | Top SNP corr | PP3 | PP4 | joint |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | NTR | Blood | SEC14L1 | 0.03 | 0.01 | blup | 625 | 0.01 | 0.00034 | 2.0 | 5.3 | 8.6e-08 | -0.16 | 0.36 | 0.04 | TRUE |
| 2 | The Cancer Genome Atlas | Head and Neck Squamous Cell Carcinoma | SEPT9 | 0.04 | 0.01 | blup | 133 | 0.02 | 0.00484 | -1.5 | -5.3 | 1.5e-07 | 0.01 | 0.02 | 0.11 | TRUE |