Best TWAS P=1.98e-07 · Best GWAS P=8.66e-10 conditioned to 4.49e-05
| # | Study | Tissue | Gene | h2 | eQTL R2 | model | # weights | model R2 | model R2 P | eQTL GWAS Z | TWAS Z | TWAS P | Top SNP corr | PP3 | PP4 | joint |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | NTR | Blood | GPD2 | 0.02 | 0.03 | lasso | 4 | 0.03 | 5.5e-09 | 5.1 | 5.2 | 2.7e-07 | 0.48 | 0.53 | 0.47 | FALSE |
| 2 | YFS | Blood | GPD2 | 0.05 | 0.06 | lasso | 7 | 0.06 | 1.4e-19 | 5.0 | 5.2 | 2.0e-07 | 0.50 | 0.53 | 0.46 | TRUE |