Best TWAS P=1.63e-09 · Best GWAS P=7.09e-11 conditioned to 2.04e-07
| # | Study | Tissue | Gene | h2 | eQTL R2 | model | # weights | model R2 | model R2 P | eQTL GWAS Z | TWAS Z | TWAS P | Top SNP corr | PP3 | PP4 | joint |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | The Cancer Genome Atlas | Kidney Renal Clear Cell Carcinoma | KDR | 0.05 | 0.04 | enet | 8 | 0.03 | 0.00018 | -5.6 | -6 | 1.6e-09 | -0.25 | 0.11 | 0.4 | TRUE |
| 2 | The Cancer Genome Atlas | Prostate Adenocarcinoma | KDR | 0.05 | 0.02 | lasso | 2 | 0.02 | 0.00510 | -4.6 | -6 | 2.3e-09 | -0.04 | 0.06 | 0.1 | FALSE |