Best TWAS P=5.9e-08 · Best GWAS P=8.28e-08 conditioned to 0.0794
| # | Study | Tissue | Gene | h2 | eQTL R2 | model | # weights | model R2 | model R2 P | eQTL GWAS Z | TWAS Z | TWAS P | Top SNP corr | PP3 | PP4 | joint |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | The Cancer Genome Atlas | Breast Invasive Carcinoma | KLF9 | 0.01 | 0.01 | blup | 37 | 0.01 | 0.0179 | -4.7 | 5.2 | 2.4e-07 | 0.64 | 0.04 | 0.52 | FALSE |
| 2 | The Cancer Genome Atlas | Thyroid Carcinoma | KLF9 | 0.04 | 0.01 | blup | 37 | 0.02 | 0.0099 | 5.3 | 5.4 | 5.9e-08 | 0.79 | 0.01 | 0.91 | TRUE |