Best TWAS P=1.17e-10 · Best GWAS P=4.7e-11 conditioned to 1.49e-06
| # | Study | Tissue | Gene | h2 | eQTL R2 | model | # weights | model R2 | model R2 P | eQTL GWAS Z | TWAS Z | TWAS P | Top SNP corr | PP3 | PP4 | joint |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | The Cancer Genome Atlas | Brain Lower Grade Glioma | SLCO1A2 | 0.07 | 0.04 | blup | 186 | 0.03 | 0.00027 | -4.3 | -5.7 | 1.2e-08 | -0.17 | 0.79 | 0.01 | FALSE |
| 2 | The Cancer Genome Atlas | Lung Squamous Cell Carcinoma | SLCO1B1 | 0.05 | 0.03 | blup | 160 | 0.03 | 0.00017 | -4.4 | -6.4 | 1.2e-10 | -0.31 | 0.90 | 0.01 | TRUE |