Best TWAS P=6.27e-09 · Best GWAS P=1.91e-09 conditioned to 0.0242
| # | Study | Tissue | Gene | h2 | eQTL R2 | model | # weights | model R2 | model R2 P | eQTL GWAS Z | TWAS Z | TWAS P | Top SNP corr | PP3 | PP4 | joint |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | GTEx | Testis | IRF2BP2 | 0.21 | 0.04 | lasso | 2 | 0.03 | 2.6e-02 | -4.4 | 5.5 | 4.2e-08 | 0.69 | 0.02 | 0.92 | FALSE |
| 2 | GTEx | Testis | RP4-781K5.2 | 0.27 | 0.08 | enet | 30 | 0.09 | 9.2e-05 | 4.4 | 5.8 | 6.3e-09 | 0.80 | 0.01 | 0.99 | TRUE |