[Hub]/) : Traits : Hypothyroidism (self reported) :

chr2:97,098,095-99,306,504

Best TWAS P=2.06e-09 · Best GWAS P=1.17e-09 conditioned to 0.126

Associated models

# Study Tissue Gene h2 eQTL R2 model # weights model R2 model R2 P eQTL GWAS Z TWAS Z TWAS P Top SNP corr PP3 PP4 joint
1 CommonMind Brain Pre-frontal Cortex LOC100506123 0.10 0.11 lasso 5 0.10 1.1e-12 5.0 5.2 2.0e-07 0.74 0.23 0.76 FALSE
2 GTEx Adipose Visceral Omentum ANKRD36B 0.21 0.18 lasso 6 0.18 1.9e-09 5.0 5.2 1.6e-07 0.77 0.27 0.73 FALSE
3 GTEx Breast Mammary Tissue (Female) ANKRD36B 0.13 0.10 lasso 3 0.14 7.7e-05 5.0 6.0 2.1e-09 0.91 0.00 0.96 TRUE
4 GTEx Colon Sigmoid ANKRD36B 0.35 0.18 lasso 3 0.21 5.7e-08 6.1 5.5 3.6e-08 0.95 0.00 1.00 FALSE
5 GTEx Colon Transverse AC017099.3 0.13 0.05 enet 6 0.06 7.6e-04 5.0 5.2 1.8e-07 0.78 0.12 0.76 FALSE
6 GTEx Esophagus Mucosa ANKRD36B 0.33 0.25 enet 21 0.25 7.9e-17 5.0 5.2 2.3e-07 0.77 0.27 0.72 FALSE
7 GTEx Muscle Skeletal AC017099.3 0.15 0.07 lasso 9 0.10 1.3e-09 5.0 5.2 2.5e-07 0.79 0.11 0.89 FALSE
8 GTEx Muscle Skeletal AC159540.1 0.04 0.01 lasso 6 0.01 2.3e-02 4.0 5.2 2.4e-07 0.75 0.04 0.89 FALSE
9 GTEx Nerve Tibial COX5B 0.08 0.05 lasso 4 0.06 6.3e-05 5.1 5.3 1.1e-07 0.72 0.16 0.75 FALSE
10 GTEx Pancreas AC017099.3 0.17 0.19 lasso 5 0.16 2.7e-07 4.8 5.3 1.4e-07 0.80 0.02 0.98 FALSE
11 GTEx Skin Not Sun Exposed Suprapubic ANKRD36B 0.29 0.34 lasso 5 0.33 1.7e-18 5.0 5.2 1.5e-07 0.79 0.26 0.73 FALSE
12 GTEx Small Intestine Terminal Ileum TMEM131 0.29 -0.01 enet 28 0.08 9.1e-03 -3.0 -5.8 6.8e-09 -0.53 0.03 0.37 FALSE
13 GTEx Small Intestine Terminal Ileum ANKRD36 0.22 0.03 enet 15 0.11 1.8e-03 3.4 -5.4 5.9e-08 -0.58 0.03 0.42 FALSE
14 GTEx Thyroid ANKRD36 0.11 0.08 lasso 4 0.07 3.9e-06 5.0 -5.2 2.7e-07 -0.75 0.25 0.63 FALSE
15 The Cancer Genome Atlas Bladder Urothelial Carcinoma COX5B 0.03 0.01 lasso 1 0.01 5.0e-02 5.4 -5.4 8.0e-08 -0.72 0.00 0.61 FALSE
16 The Cancer Genome Atlas Breast Invasive Carcinoma TMEM131 0.06 0.01 enet 9 0.03 3.0e-06 -3.2 -5.2 2.1e-07 -0.70 0.04 0.91 FALSE
17 The Cancer Genome Atlas Head and Neck Squamous Cell Carcinoma TMEM131 0.08 0.00 blup 72 0.01 5.4e-02 -1.4 -5.3 1.3e-07 -0.64 0.02 0.53 FALSE
18 The Cancer Genome Atlas Brain Lower Grade Glioma ZAP70 0.06 0.01 blup 38 0.00 2.1e-01 3.3 5.2 1.6e-07 0.76 0.02 0.19 FALSE