Best TWAS P=7.97e-09 · Best GWAS P=1.76e-18 conditioned to 1.54e-18
# | Study | Tissue | Gene | h2 | eQTL R2 | model | # weights | model R2 | model R2 P | eQTL GWAS Z | TWAS Z | TWAS P | Top SNP corr | PP3 | PP4 | joint |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
1 | GTEx | Thyroid | CBLB | 0.10 | 0.02 | lasso | 9 | 0.02 | 0.0083 | -4.3 | 5.2 | 2.6e-07 | -0.03 | 0.36 | 0.08 | FALSE |
2 | The Cancer Genome Atlas | Kidney Renal Clear Cell Carcinoma | CBLB | 0.05 | 0.00 | blup | 104 | 0.02 | 0.0022 | -5.6 | -5.8 | 8.0e-09 | 0.00 | 0.01 | 0.90 | TRUE |