Best TWAS P=1.48e-07 · Best GWAS P=9.13e-14 conditioned to 7.39e-14
| # | Study | Tissue | Gene | h2 | eQTL R2 | model | # weights | model R2 | model R2 P | eQTL GWAS Z | TWAS Z | TWAS P | Top SNP corr | PP3 | PP4 | joint |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | GTEx | Lung | PVT1 | 0.19 | 0.12 | lasso | 2 | 0.09 | 3.1e-07 | 5.2 | 5.1 | 3.0e-07 | 0.00 | 0.99 | 0 | FALSE |
| 2 | GTEx | Whole Blood | PVT1 | 0.12 | 0.07 | lasso | 4 | 0.06 | 6.3e-06 | 5.2 | 5.2 | 1.5e-07 | 0.01 | 0.97 | 0 | TRUE |