TWAS
hub
About
Usage
Models
Genes
Traits
[Hub]/) :
Traits
:
Hypothyroidism (self reported)
:
←
chr22:41,071,659-42,614,362
Best TWAS P=1.24e-07 · Best GWAS P=1.5e-08 conditioned to 1
41M
41.2M
41.4M
41.6M
41.8M
42M
42.2M
42.4M
42.6M
0
2
4
6
8
physical position
-log10 P
Marginal
▼
Associated models
#
Study
Tissue
Gene
h2
eQTL R2
model
# weights
model R2
model R2 P
eQTL GWAS Z
TWAS Z
TWAS P
Top SNP corr
PP3
PP4
joint
3
NTR
Blood
TEF
0.01
0.02
lasso
2
0.02
3.8e-06
-5.2
-5.3
1.2e-07
0.97
0.02
0.97
TRUE
4
YFS
Blood
TEF
0.09
0.17
lasso
2
0.17
9.0e-53
-5.3
-5.3
1.3e-07
0.95
0.02
0.98
FALSE
5
The Cancer Genome Atlas
Colon Adenocarcinoma
TEF
0.04
0.03
blup
36
0.03
9.5e-03
-4.8
-5.3
1.4e-07
0.97
0.02
0.79
FALSE
1
GTEx
Nerve Tibial
ACO2
0.06
0.05
lasso
5
0.04
8.5e-04
-4.8
-5.2
1.6e-07
0.88
0.10
0.88
FALSE
2
GTEx
Testis
TEF
0.06
0.05
lasso
5
0.04
5.5e-03
-5.2
-5.1
2.9e-07
0.96
0.04
0.90
FALSE