Best TWAS P=7.14e-08 · Best GWAS P=1.26e-06 conditioned to 0.776
| # | Study | Tissue | Gene | h2 | eQTL R2 | model | # weights | model R2 | model R2 P | eQTL GWAS Z | TWAS Z | TWAS P | Top SNP corr | PP3 | PP4 | joint |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | GTEx | Heart Atrial Appendage | PMS2P5 | 0.12 | 0.03 | lasso | 5 | 0.07 | 3.8e-04 | -4.8 | 5.4 | 7.1e-08 | -0.92 | 0.00 | 0.68 | TRUE |
| 2 | GTEx | Lung | STAG3L2 | 0.13 | 0.11 | enet | 11 | 0.09 | 1.4e-07 | -4.0 | 5.3 | 1.3e-07 | -0.77 | 0.05 | 0.88 | FALSE |
| 3 | GTEx | Testis | STAG3L2 | 0.26 | 0.13 | lasso | 4 | 0.22 | 4.0e-10 | -4.0 | 5.1 | 2.9e-07 | -0.88 | 0.01 | 0.98 | FALSE |