Best TWAS P=2.28e-07 · Best GWAS P=1.48e-09 conditioned to 0.00173
# | Study | Tissue | Gene | h2 | eQTL R2 | model | # weights | model R2 | model R2 P | eQTL GWAS Z | TWAS Z | TWAS P | Top SNP corr | PP3 | PP4 | joint |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
1 | The Cancer Genome Atlas | Lung Squamous Cell Carcinoma | NKX2-8 | 0.03 | 0.02 | blup | 67 | 0.02 | 0.0033 | -4.5 | 5.2 | 2.3e-07 | -0.84 | 0.02 | 0.85 | TRUE |