TWAS
hub
About
Usage
Models
Genes
Traits
[Hub]/) :
Traits
:
Prostate Cancer
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chr8:22,842,752-24,224,911
Best TWAS P=6.4e-11 · Best GWAS P=4.82e-28 conditioned to 7.11e-17
22.8M
23M
23.2M
23.4M
23.6M
23.8M
24M
24.2M
0
5
10
15
20
25
physical position
-log10 P
Marginal
▼
Associated models
#
Study
Tissue
Gene
h2
eQTL R2
model
# weights
model R2
model R2 P
eQTL GWAS Z
TWAS Z
TWAS P
Top SNP corr
PP3
PP4
joint
1
NTR
Blood
NKX3-1
0.30
0.33
enet
37
0.36
6.3e-123
4.1
6.5
6.4e-11
-0.01
1.00
0.00
TRUE
2
The Cancer Genome Atlas
Breast Invasive Carcinoma
NKX3-1
0.03
0.00
lasso
3
0.02
2.0e-04
-3.1
5.4
6.0e-08
0.61
0.03
0.57
TRUE