TWAS
hub
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Usage
Models
Genes
Traits
[Hub]/) :
Traits
:
Prostate Cancer
:
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chr1:150,527,354-151,021,509
Best TWAS P=1.54e-08 · Best GWAS P=5.41e-09 conditioned to 0.13
150.5M
150.6M
150.7M
150.8M
150.9M
151M
0
2
4
6
8
physical position
-log10 P
Marginal
▼
Associated models
#
Study
Tissue
Gene
h2
eQTL R2
model
# weights
model R2
model R2 P
eQTL GWAS Z
TWAS Z
TWAS P
Top SNP corr
PP3
PP4
joint
1
The Cancer Genome Atlas
Prostate Adenocarcinoma
CTSK
0.05
0.03
lasso
2
0.02
0.0013
-5.7
5.7
1.5e-08
-0.94
0
0.99
TRUE