TWAS
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Traits
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Prostate Cancer
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chr2:20,189,015-21,719,583
Best TWAS P=1.08e-08 · Best GWAS P=1.64e-10 conditioned to 0.00158
20.2M
20.4M
20.6M
20.8M
21M
21.2M
21.4M
21.6M
21.8M
0
2
4
6
8
10
physical position
-log10 P
Marginal
▼
Associated models
#
Study
Tissue
Gene
h2
eQTL R2
model
# weights
model R2
model R2 P
eQTL GWAS Z
TWAS Z
TWAS P
Top SNP corr
PP3
PP4
joint
3
GTEx
Stomach
C2orf43
0.26
0.14
enet
12
0.18
4.1e-09
3.7
-5.7
1.1e-08
-0.76
0.01
0.99
TRUE
1
GTEx
Skin Sun Exposed Lower leg
C2orf43
0.19
0.11
enet
32
0.12
3.9e-10
3.7
-5.3
8.9e-08
-0.67
0.04
0.96
FALSE
2
GTEx
Spleen
C2orf43
0.49
0.07
lasso
11
0.21
5.1e-06
6.4
-5.3
1.1e-07
-0.67
0.01
0.94
FALSE