TWAS
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Genes
Traits
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Traits
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Blood Red Count
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chr2:230,499,928-231,967,886
Best TWAS P=1.15e-08 · Best GWAS P=1.09e-08 conditioned to 9.01e-05
230.6M
230.8M
231M
231.2M
231.4M
231.6M
231.8M
232M
0
2
4
6
8
physical position
-log10 P
Marginal
▼
Associated models
#
Study
Tissue
Gene
h2
eQTL R2
model
# weights
model R2
model R2 P
eQTL GWAS Z
TWAS Z
TWAS P
Top SNP corr
PP3
PP4
joint
4
The Cancer Genome Atlas
Thyroid Carcinoma
SP140L
0.05
0.00
blup
96
0.02
1.0e-02
1.5
-5.7
1.2e-08
0.36
0.26
0.16
TRUE
2
The Cancer Genome Atlas
Bladder Urothelial Carcinoma
SP140L
0.06
0.02
blup
96
0.03
1.4e-03
1.6
-5.4
6.5e-08
0.20
0.30
0.09
FALSE
3
The Cancer Genome Atlas
Brain Lower Grade Glioma
SP140
0.04
0.00
blup
134
0.00
1.1e-01
-5.7
5.3
9.6e-08
-0.81
0.01
0.81
FALSE
1
GTEx
Skin Sun Exposed Lower leg
SP140L
0.12
0.09
enet
17
0.08
5.0e-07
3.9
-5.1
3.0e-07
0.03
0.95
0.03
FALSE