TWAS
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Usage
Models
Genes
Traits
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Traits
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Blood Red Count
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chr3:178,502,029-179,034,710
Best TWAS P=1.24e-09 · Best GWAS P=8.16e-09 conditioned to 0.0189
178.5M
178.6M
178.7M
178.8M
178.9M
179M
0
2
4
6
8
physical position
-log10 P
Marginal
▼
Associated models
#
Study
Tissue
Gene
h2
eQTL R2
model
# weights
model R2
model R2 P
eQTL GWAS Z
TWAS Z
TWAS P
Top SNP corr
PP3
PP4
joint
1
The Cancer Genome Atlas
Breast Invasive Carcinoma
ZMAT3
0.02
0.01
enet
10
0.02
1e-05
-4.9
-6.1
1.2e-09
-0.66
0.02
0.93
TRUE
2
The Cancer Genome Atlas
Prostate Adenocarcinoma
ZMAT3
0.06
0.02
lasso
2
0.03
5e-04
-4.9
-5.6
1.9e-08
-0.57
0.03
0.81
FALSE