[Hub]/) : Traits : Blood Red Count :

chr3:182,942,402-184,724,719

Best TWAS P=2.36e-11 · Best GWAS P=1.13e-10 conditioned to 0.44

Associated models

# Study Tissue Gene h2 eQTL R2 model # weights model R2 model R2 P eQTL GWAS Z TWAS Z TWAS P Top SNP corr PP3 PP4 joint
1 GTEx Adipose Subcutaneous AP2M1 0.20 0.06 enet 32 0.08 8.2e-07 5.4 5.6 2.4e-08 0.33 0.81 0.14 FALSE
2 GTEx Artery Tibial PSMD2 0.13 0.09 lasso 5 0.08 1.3e-06 -5.1 5.3 9.9e-08 0.52 0.78 0.13 FALSE
3 GTEx Brain Cerebellum ABCC5 0.18 0.18 lasso 5 0.13 1.4e-04 -5.6 -5.5 4.2e-08 -0.21 0.23 0.36 FALSE
4 GTEx Esophagus Mucosa ABCC5 0.13 0.10 lasso 5 0.09 1.8e-06 6.2 6.2 6.3e-10 0.27 0.07 0.93 FALSE
5 GTEx Heart Left Ventricle AP2M1 0.10 0.06 enet 15 0.03 9.7e-03 5.4 5.7 1.0e-08 0.41 0.60 0.11 FALSE
6 GTEx Muscle Skeletal ABCF3 0.10 0.07 lasso 4 0.09 3.7e-09 4.7 5.2 1.9e-07 0.37 0.98 0.02 FALSE
7 NTR Blood ABCC5 0.08 0.11 enet 26 0.11 6.8e-33 -5.6 5.8 7.5e-09 0.24 0.51 0.49 FALSE
8 The Cancer Genome Atlas Bladder Urothelial Carcinoma ABCC5 0.05 0.04 enet 8 0.03 7.0e-04 5.9 6.3 2.8e-10 0.20 0.03 0.94 TRUE
9 The Cancer Genome Atlas Brain Lower Grade Glioma ECE2 0.04 0.02 blup 61 0.03 3.5e-04 5.2 6.7 2.4e-11 0.70 0.03 0.94 TRUE
10 The Cancer Genome Atlas Testicular Germ Cell Tumors VWA5B2 0.10 0.04 blup 51 0.04 1.8e-02 4.4 -6.3 3.4e-10 -0.44 0.04 0.23 FALSE