[Hub]/) : Traits : Blood Red Count : ← →

chr1:27,520,865-29,264,889

Best TWAS P=1.66e-08 · Best GWAS P=1.33e-08 conditioned to 0.0125

Associated models

# Study Tissue Gene h2 eQTL R2 model # weights model R2 model R2 P eQTL GWAS Z TWAS Z TWAS P Top SNP corr PP3 PP4 joint
1 GTEx Artery Aorta RPA2 0.17 0.08 lasso 7 0.08 4.1e-05 -5.3 -5.2 2.3e-07 0.62 0.11 0.83 FALSE
2 GTEx Breast Mammary Tissue RPA2 0.13 0.02 lasso 4 0.04 2.4e-03 -5.3 -5.3 1.3e-07 0.70 0.07 0.50 FALSE
3 GTEx Colon Sigmoid RP5-1092A3.4 0.20 0.09 lasso 4 0.08 6.4e-04 5.3 -5.2 1.6e-07 0.14 0.12 0.67 FALSE
4 GTEx Colon Transverse RPA2 0.12 0.09 lasso 2 0.04 6.9e-03 -5.3 -5.3 1.2e-07 0.61 0.03 0.85 FALSE
5 GTEx Esophagus Muscularis RPA2 0.16 0.17 lasso 5 0.17 2.4e-10 -5.3 -5.2 1.9e-07 0.62 0.09 0.91 FALSE
6 GTEx Lung RPA2 0.12 0.08 lasso 4 0.08 1.5e-06 -5.3 -5.3 1.4e-07 0.63 0.11 0.87 FALSE
7 GTEx Pituitary RP5-1092A3.4 0.55 0.31 lasso 7 0.31 1.2e-08 4.7 -5.3 1.4e-07 0.15 0.44 0.52 TRUE
8 GTEx Thyroid RPA2 0.09 0.10 enet 19 0.11 1.8e-08 -5.3 -5.6 1.7e-08 0.49 0.09 0.90 TRUE
9 GTEx Whole Blood RPA2 0.16 0.10 enet 13 0.08 1.2e-07 -5.3 -5.6 2.4e-08 0.61 0.07 0.93 FALSE
10 NTR Blood ATPIF1 0.03 0.02 lasso 3 0.02 2.5e-08 5.2 -5.2 2.0e-07 0.14 0.14 0.86 FALSE
11 NTR Blood RPA2 0.09 0.09 lasso 4 0.09 9.0e-27 -5.6 5.5 4.0e-08 -0.44 0.02 0.98 FALSE
12 The Cancer Genome Atlas Head and Neck Squamous Cell Carcinoma C1orf38 0.03 0.01 blup 35 0.02 1.7e-03 -5.4 5.2 1.9e-07 -0.38 0.02 0.97 FALSE