Best TWAS P=2.76e-08 · Best GWAS P=8.07e-08 conditioned to 1
# | Study | Tissue | Gene | h2 | eQTL R2 | model | # weights | model R2 | model R2 P | eQTL GWAS Z | TWAS Z | TWAS P | Top SNP corr | PP3 | PP4 | joint |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
1 | GTEx | Artery Tibial | DDX5 | 0.12 | 0.13 | lasso | 2 | 0.12 | 1.5e-09 | -5.4 | 5.3 | 9.0e-08 | -1.00 | 0 | 1 | FALSE |
2 | NTR | Blood | DDX5 | 0.10 | 0.04 | lasso | 3 | 0.04 | 5.2e-13 | -5.4 | 5.4 | 6.2e-08 | -1.00 | 0 | 1 | FALSE |
3 | YFS | Blood | DDX5 | 0.42 | 0.21 | bslmm | 215 | 0.21 | 7.7e-68 | -5.4 | 5.6 | 2.8e-08 | -0.99 | 0 | 1 | TRUE |