Best TWAS P=2.5e-08 · Best GWAS P=4.88e-10 conditioned to 0.000161
# | Study | Tissue | Gene | h2 | eQTL R2 | model | # weights | model R2 | model R2 P | eQTL GWAS Z | TWAS Z | TWAS P | Top SNP corr | PP3 | PP4 | joint |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
1 | The Cancer Genome Atlas | Brain Lower Grade Glioma | ARID5B | 0.05 | 0.05 | lasso | 2 | 0.04 | 3.7e-05 | 5.6 | -5.6 | 2.5e-08 | -0.55 | 0.03 | 0.96 | TRUE |