Best TWAS P=3.06e-16 · Best GWAS P=1.7e-15 conditioned to 1
# | Study | Tissue | Gene | h2 | eQTL R2 | model | # weights | model R2 | model R2 P | eQTL GWAS Z | TWAS Z | TWAS P | Top SNP corr | PP3 | PP4 | joint |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
1 | GTEx | Adipose Subcutaneous | IRAK1BP1 | 0.12 | 0.10 | lasso | 4 | 0.15 | 2.7e-12 | 7.9 | 7.4 | 1.3e-13 | 0.90 | 0.04 | 0.96 | FALSE |
2 | GTEx | Adipose Visceral Omentum | IRAK1BP1 | 0.17 | 0.16 | enet | 20 | 0.19 | 2.5e-10 | 7.9 | 7.6 | 3.5e-14 | 0.97 | 0.03 | 0.97 | FALSE |
3 | GTEx | Adrenal Gland | IRAK1BP1 | 0.33 | 0.40 | enet | 31 | 0.40 | 1.5e-15 | 7.9 | 8.2 | 3.1e-16 | 0.97 | 0.03 | 0.97 | TRUE |
4 | GTEx | Artery Aorta | IRAK1BP1 | 0.17 | 0.15 | lasso | 1 | 0.11 | 1.6e-06 | 7.9 | 7.9 | 3.4e-15 | 1.00 | 0.03 | 0.97 | FALSE |
5 | GTEx | Artery Coronary | IRAK1BP1 | 0.11 | -0.01 | lasso | 3 | 0.01 | 1.8e-01 | 7.9 | 7.5 | 9.2e-14 | 0.85 | 0.04 | 0.83 | FALSE |
6 | GTEx | Artery Coronary | PHIP | 0.17 | 0.02 | lasso | 5 | 0.02 | 8.5e-02 | 4.6 | 6.7 | 2.7e-11 | 0.71 | 0.11 | 0.63 | FALSE |
7 | GTEx | Artery Tibial | IRAK1BP1 | 0.11 | 0.15 | lasso | 4 | 0.16 | 1.4e-12 | 7.9 | 7.7 | 1.8e-14 | 0.98 | 0.03 | 0.97 | FALSE |
8 | GTEx | Brain Caudate basal ganglia | IRAK1BP1 | 0.11 | 0.12 | enet | 7 | 0.09 | 1.3e-03 | -6.5 | 5.9 | 3.3e-09 | 0.91 | 0.04 | 0.80 | FALSE |
9 | GTEx | Brain Cerebellar Hemisphere | IRAK1BP1 | 0.21 | 0.13 | enet | 26 | 0.12 | 4.4e-04 | -5.8 | 6.3 | 2.8e-10 | 0.85 | 0.04 | 0.95 | FALSE |
10 | GTEx | Brain Hypothalamus | IRAK1BP1 | 0.21 | 0.16 | enet | 28 | 0.18 | 4.4e-05 | -6.0 | 6.1 | 1.2e-09 | 0.85 | 0.05 | 0.91 | FALSE |
11 | GTEx | Brain Nucleus accumbens basal ganglia | IRAK1BP1 | 0.11 | 0.08 | lasso | 10 | 0.07 | 6.0e-03 | 7.8 | -8.0 | 8.8e-16 | -0.97 | 0.04 | 0.87 | FALSE |
12 | GTEx | Breast Mammary Tissue | IRAK1BP1 | 0.09 | 0.07 | enet | 10 | 0.07 | 1.1e-04 | 7.9 | 7.9 | 2.6e-15 | 0.88 | 0.04 | 0.94 | FALSE |
13 | GTEx | Breast Mammary Tissue (Male) | IRAK1BP1 | 0.10 | 0.00 | enet | 2 | 0.00 | 3.9e-01 | -6.0 | 6.0 | 1.9e-09 | 0.73 | 0.05 | 0.29 | FALSE |
14 | GTEx | Cells Transformed fibroblasts | IRAK1BP1 | 0.25 | 0.35 | enet | 30 | 0.36 | 3.5e-28 | 7.9 | 7.6 | 2.8e-14 | 0.95 | 0.03 | 0.97 | FALSE |
15 | GTEx | Colon Sigmoid | IRAK1BP1 | 0.19 | 0.20 | lasso | 2 | 0.17 | 1.0e-06 | 7.9 | 7.9 | 3.4e-15 | 1.00 | 0.03 | 0.97 | FALSE |
16 | GTEx | Colon Transverse | IRAK1BP1 | 0.11 | 0.18 | lasso | 2 | 0.16 | 4.0e-08 | -5.8 | 5.8 | 6.1e-09 | 0.81 | 0.11 | 0.89 | FALSE |
17 | GTEx | Esophagus Gastroesophageal Junction | IRAK1BP1 | 0.18 | 0.18 | enet | 34 | 0.18 | 4.7e-07 | 7.9 | 7.5 | 9.1e-14 | 0.97 | 0.03 | 0.97 | FALSE |
18 | GTEx | Esophagus Mucosa | IRAK1BP1 | 0.16 | 0.13 | lasso | 4 | 0.13 | 4.2e-09 | -4.9 | 5.5 | 4.2e-08 | 0.75 | 0.95 | 0.05 | FALSE |
19 | GTEx | Esophagus Muscularis | IRAK1BP1 | 0.17 | 0.22 | lasso | 4 | 0.22 | 1.6e-13 | 7.9 | 7.6 | 4.0e-14 | 0.98 | 0.03 | 0.97 | FALSE |
20 | GTEx | Esophagus Muscularis | PHIP | 0.08 | 0.04 | enet | 15 | 0.02 | 3.6e-02 | 7.9 | 6.9 | 3.7e-12 | 0.88 | 0.04 | 0.93 | FALSE |
21 | GTEx | Heart Atrial Appendage | IRAK1BP1 | 0.15 | 0.14 | lasso | 2 | 0.12 | 4.6e-06 | 7.9 | 7.6 | 3.0e-14 | 0.98 | 0.03 | 0.96 | FALSE |
22 | GTEx | Heart Left Ventricle | IRAK1BP1 | 0.17 | 0.20 | lasso | 5 | 0.20 | 8.7e-11 | 7.8 | 7.8 | 4.4e-15 | 1.00 | 0.03 | 0.97 | FALSE |
23 | GTEx | Liver | IRAK1BP1 | 0.16 | 0.01 | enet | 22 | 0.06 | 9.3e-03 | 7.9 | 5.8 | 5.6e-09 | 0.86 | 0.05 | 0.74 | FALSE |
24 | GTEx | Lung | IRAK1BP1 | 0.14 | 0.18 | lasso | 5 | 0.17 | 3.9e-13 | 7.9 | 8.0 | 1.4e-15 | 0.99 | 0.03 | 0.97 | FALSE |
25 | GTEx | Muscle Skeletal | IRAK1BP1 | 0.10 | 0.11 | lasso | 2 | 0.10 | 1.3e-09 | 7.9 | 8.0 | 1.2e-15 | 1.00 | 0.03 | 0.97 | FALSE |
26 | GTEx | Nerve Tibial | IRAK1BP1 | 0.12 | 0.16 | lasso | 6 | 0.14 | 8.8e-10 | -5.8 | 7.0 | 3.4e-12 | 0.93 | 0.04 | 0.96 | FALSE |
27 | GTEx | Ovary | IRAK1BP1 | 0.13 | 0.15 | lasso | 2 | 0.06 | 1.2e-02 | 7.8 | 7.8 | 4.2e-15 | 1.00 | 0.04 | 0.90 | FALSE |
28 | GTEx | Pancreas | IRAK1BP1 | 0.24 | 0.23 | lasso | 8 | 0.25 | 6.1e-11 | 7.9 | 7.7 | 1.5e-14 | 0.96 | 0.03 | 0.97 | FALSE |
29 | GTEx | Prostate | IRAK1BP1 | 0.15 | 0.08 | enet | 7 | 0.09 | 2.4e-03 | 7.9 | 7.5 | 9.0e-14 | 0.92 | 0.05 | 0.87 | FALSE |
30 | GTEx | Skin Not Sun Exposed Suprapubic | IRAK1BP1 | 0.10 | 0.09 | lasso | 4 | 0.08 | 3.3e-05 | -4.8 | 5.6 | 2.3e-08 | 0.76 | 0.69 | 0.26 | FALSE |
31 | GTEx | Skin Sun Exposed Lower leg | IRAK1BP1 | 0.17 | 0.18 | lasso | 4 | 0.18 | 2.0e-14 | -5.8 | 5.9 | 2.9e-09 | 0.81 | 0.97 | 0.03 | FALSE |
32 | GTEx | Spleen | IRAK1BP1 | 0.20 | 0.16 | enet | 6 | 0.12 | 5.3e-04 | -5.8 | 5.8 | 7.0e-09 | 0.75 | 0.09 | 0.67 | FALSE |
33 | GTEx | Stomach | IRAK1BP1 | 0.18 | 0.14 | enet | 32 | 0.14 | 2.6e-07 | 7.9 | 7.3 | 2.2e-13 | 0.95 | 0.03 | 0.97 | FALSE |
34 | GTEx | Testis | IRAK1BP1 | 0.39 | 0.56 | lasso | 11 | 0.58 | 7.7e-31 | 7.9 | 7.9 | 3.6e-15 | 1.00 | 0.03 | 0.97 | FALSE |
35 | GTEx | Thyroid | IRAK1BP1 | 0.09 | 0.12 | lasso | 9 | 0.11 | 5.2e-09 | 7.9 | 8.1 | 6.8e-16 | 0.99 | 0.03 | 0.97 | FALSE |
36 | METSIM | Adipose | IRAK1BP1 | 0.15 | 0.17 | lasso | 6 | 0.16 | 1.1e-23 | -5.8 | 5.7 | 9.0e-09 | 0.81 | 1.00 | 0.00 | FALSE |
37 | YFS | Blood | PHIP | 0.05 | 0.07 | lasso | 5 | 0.08 | 1.8e-24 | -5.8 | 6.0 | 2.4e-09 | 0.80 | 1.00 | 0.00 | FALSE |
38 | The Cancer Genome Atlas | Lung Adenocarcinoma | IRAK1BP1 | 0.03 | 0.03 | lasso | 4 | 0.02 | 1.2e-03 | -5.8 | 6.2 | 6.5e-10 | 0.85 | 0.03 | 0.76 | FALSE |
39 | The Cancer Genome Atlas | Thyroid Carcinoma | PHIP | 0.11 | 0.08 | blup | 75 | 0.07 | 2.6e-07 | 7.9 | 6.4 | 1.1e-10 | 0.90 | 0.02 | 0.98 | FALSE |