Best TWAS P=4.92e-08 · Best GWAS P=4.56e-08 conditioned to 2.6e-05
| # | Study | Tissue | Gene | h2 | eQTL R2 | model | # weights | model R2 | model R2 P | eQTL GWAS Z | TWAS Z | TWAS P | Top SNP corr | PP3 | PP4 | joint |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | GTEx | Whole Blood | CRLF3 | 0.05 | 0.01 | enet | 21 | 0.01 | 3.4e-02 | -4.2 | 5.5 | 4.9e-08 | 0.26 | 0.14 | 0.46 | TRUE |
| 2 | The Cancer Genome Atlas | Head and Neck Squamous Cell Carcinoma | SUZ12P | 0.06 | 0.05 | lasso | 3 | 0.05 | 1.2e-06 | -4.3 | 5.2 | 2.3e-07 | 0.50 | 0.01 | 0.91 | FALSE |