TWAS
hub
About
Usage
Models
Genes
Traits
[Hub]/) :
Traits
:
Ulcerative Colitis (UC)
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chr4:122,842,267-123,530,993
Best TWAS P=2.13e-08 · Best GWAS P=1.5e-07 conditioned to 0.0173
122.9M
123M
123.1M
123.2M
123.3M
123.4M
123.5M
0
2
4
6
physical position
-log10 P
Marginal
▼
Associated models
#
Study
Tissue
Gene
h2
eQTL R2
model
# weights
model R2
model R2 P
eQTL GWAS Z
TWAS Z
TWAS P
Top SNP corr
PP3
PP4
joint
1
The Cancer Genome Atlas
Esophageal Carcinoma
KIAA1109
0.32
0.02
blup
45
0.02
7.4e-02
5.0
-5.6
2.1e-08
-0.60
0
0.81
TRUE
2
The Cancer Genome Atlas
Brain Lower Grade Glioma
KIAA1109
0.06
0.05
lasso
2
0.03
7.1e-05
5.1
-5.2
1.8e-07
-0.75
0
1.00
FALSE