Best TWAS P=2.54e-07 · Best GWAS P=4.51e-07 conditioned to 1
| # | Study | Tissue | Gene | h2 | eQTL R2 | model | # weights | model R2 | model R2 P | eQTL GWAS Z | TWAS Z | TWAS P | Top SNP corr | PP3 | PP4 | joint |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | YFS | Blood | TOM1 | 0.13 | 0.23 | lasso | 10 | 0.24 | 3.1e-77 | -5.0 | -5.2 | 2.5e-07 | 0.96 | 0.00 | 1.00 | TRUE |
| 2 | The Cancer Genome Atlas | Breast Invasive Carcinoma | HMGXB4 | 0.01 | 0.01 | blup | 59 | 0.01 | 8.3e-03 | -4.5 | -5.1 | 2.8e-07 | 0.81 | 0.02 | 0.74 | FALSE |