Best TWAS P=1.38e-09 · Best GWAS P=2e-41 conditioned to 5.82e-38
| # | Study | Tissue | Gene | h2 | eQTL R2 | model | # weights | model R2 | model R2 P | eQTL GWAS Z | TWAS Z | TWAS P | Top SNP corr | PP3 | PP4 | joint |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | The Cancer Genome Atlas | Kidney Renal Papillary Cell Carcinoma | IL23R | 0.06 | 0.03 | blup | 107 | 0.03 | 0.00700 | 3.63 | 5.7 | 1.2e-08 | -0.13 | 0.15 | 0.10 | FALSE |
| 2 | The Cancer Genome Atlas | Rectum Adenocarcinoma | IL23R | 0.17 | 0.03 | blup | 108 | 0.15 | 0.00023 | -0.73 | 6.1 | 1.4e-09 | -0.11 | 0.08 | 0.05 | TRUE |