Best TWAS P=2.56e-11 · Best GWAS P=9e-18 conditioned to 6.18e-08
| # | Study | Tissue | Gene | h2 | eQTL R2 | model | # weights | model R2 | model R2 P | eQTL GWAS Z | TWAS Z | TWAS P | Top SNP corr | PP3 | PP4 | joint |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | GTEx | Breast Mammary Tissue (Male) | GPR153 | 0.07 | -0.01 | lasso | 3 | 0.00 | 3.2e-01 | 6.1 | -5.8 | 5.0e-09 | -0.78 | 0.04 | 0.12 | FALSE |
| 2 | The Cancer Genome Atlas | Colon Adenocarcinoma | ICMT | 0.09 | 0.00 | blup | 45 | 0.01 | 4.8e-02 | 4.9 | -5.2 | 2.6e-07 | -0.65 | 0.01 | 0.17 | FALSE |
| 3 | The Cancer Genome Atlas | Kidney Renal Clear Cell Carcinoma | ICMT | 0.08 | 0.01 | blup | 44 | 0.05 | 8.9e-07 | 8.6 | -6.7 | 2.6e-11 | -0.76 | 0.00 | 1.00 | TRUE |