TWAS
hub
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Usage
Models
Genes
Traits
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Traits
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Pulse rate, automated reading
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chr15:62,636,766-64,056,437
Best TWAS P=8.47e-09 · Best GWAS P=1.59e-08 conditioned to 0.0885
62.6M
62.8M
63M
63.2M
63.4M
63.6M
63.8M
64M
0
2
4
6
8
physical position
-log10 P
Conditional
▼
Associated models
#
Study
Tissue
Gene
h2
eQTL R2
model
# weights
model R2
model R2 P
eQTL GWAS Z
TWAS Z
TWAS P
Top SNP corr
PP3
PP4
joint
2
The Cancer Genome Atlas
Testicular Germ Cell Tumors
LACTB
0.19
0.08
blup
52
0.07
0.0014
-4.2
5.8
8.5e-09
-0.81
0.01
0.68
TRUE
1
GTEx
Brain Nucleus accumbens basal ganglia
TPM1
0.37
0.22
lasso
8
0.01
0.1400
-5.6
-5.5
4.3e-08
0.95
0.00
0.98
FALSE