Best TWAS P=6.4e-09 · Best GWAS P=2.83e-09 conditioned to 0.00279
# | Study | Tissue | Gene | h2 | eQTL R2 | model | # weights | model R2 | model R2 P | eQTL GWAS Z | TWAS Z | TWAS P | Top SNP corr | PP3 | PP4 | joint |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
1 | GTEx | Adipose Visceral Omentum | ATP6V0D1 | 0.12 | 0.03 | lasso | 6 | 0.03 | 8.3e-03 | -4.7 | 5.2 | 2.2e-07 | -0.11 | 0.01 | 0.60 | TRUE |
2 | GTEx | Esophagus Mucosa | NAE1 | 0.09 | 0.08 | lasso | 1 | 0.06 | 4.7e-05 | 5.8 | -5.8 | 6.4e-09 | -0.91 | 0.02 | 0.98 | TRUE |