Best TWAS P=3.43e-09 · Best GWAS P=2.74e-10 conditioned to 0.00032
| # | Study | Tissue | Gene | h2 | eQTL R2 | model | # weights | model R2 | model R2 P | eQTL GWAS Z | TWAS Z | TWAS P | Top SNP corr | PP3 | PP4 | joint |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | GTEx | Breast Mammary Tissue (Female) | PRPF6 | 0.10 | -0.01 | enet | 32 | -0.01 | 0.78 | 5.3 | 5.2 | 2.7e-07 | 0.02 | 0.02 | 0.23 | TRUE |
| 2 | GTEx | Breast Mammary Tissue (Female) | TCFL5 | 0.12 | 0.09 | lasso | 4 | 0.02 | 0.10 | 6.1 | -5.9 | 3.4e-09 | -0.54 | 0.04 | 0.38 | TRUE |