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Pulse rate, automated reading
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chr2:47,224,927-48,727,280
Best TWAS P=5.77e-11 · Best GWAS P=8.84e-10 conditioned to 0.089
47.2M
47.4M
47.6M
47.8M
48M
48.2M
48.4M
48.6M
48.8M
0
2
4
6
8
physical position
-log10 P
Marginal
▼
Associated models
#
Study
Tissue
Gene
h2
eQTL R2
model
# weights
model R2
model R2 P
eQTL GWAS Z
TWAS Z
TWAS P
Top SNP corr
PP3
PP4
joint
4
The Cancer Genome Atlas
Brain Lower Grade Glioma
MSH6
0.03
0.01
blup
26
0.01
1.5e-02
5.0
6.5
5.8e-11
0.77
0.01
0.92
TRUE
1
GTEx
Artery Tibial
MSH6
0.09
0.04
lasso
2
0.03
4.1e-03
5.3
5.9
3.2e-09
0.74
0.03
0.95
FALSE
3
The Cancer Genome Atlas
Kidney Renal Clear Cell Carcinoma
MSH6
0.07
0.02
blup
26
0.06
6.2e-07
6.1
5.6
2.2e-08
0.68
0.00
0.99
FALSE
5
The Cancer Genome Atlas
Thyroid Carcinoma
MSH6
0.11
0.06
enet
6
0.12
5.3e-12
5.3
5.5
4.3e-08
0.51
0.17
0.83
FALSE
2
GTEx
Thyroid
MSH6
0.15
0.17
enet
12
0.16
3.5e-12
5.3
5.3
1.1e-07
0.59
0.14
0.86
FALSE