Best TWAS P=4.22e-08 · Best GWAS P=3.26e-21 conditioned to 3.95e-22
# | Study | Tissue | Gene | h2 | eQTL R2 | model | # weights | model R2 | model R2 P | eQTL GWAS Z | TWAS Z | TWAS P | Top SNP corr | PP3 | PP4 | joint |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
1 | The Cancer Genome Atlas | Glioblastoma Multiforme | FNDC3B | 0.27 | 0.05 | lasso | 6 | 0.08 | 0.0018 | -4.5 | 5.5 | 5.1e-08 | 0.00 | 0.08 | 0.05 | FALSE |
2 | The Cancer Genome Atlas | Kidney Renal Clear Cell Carcinoma | FNDC3B | 0.07 | 0.02 | enet | 6 | 0.02 | 0.0039 | -5.1 | 5.5 | 4.2e-08 | -0.04 | 0.42 | 0.02 | TRUE |