TWAS
hub
About
Usage
Models
Genes
Traits
[Hub]/) :
Traits
:
Past tobacco smoking
:
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chr9:127,218,258-128,824,378
Best TWAS P=6.61e-08 · Best GWAS P=2.25e-07 conditioned to 0.00944
Associated models
#
Study
Tissue
Gene
h2
eQTL R2
model
# weights
model R2
model R2 P
eQTL GWAS Z
TWAS Z
TWAS P
Top SNP corr
PP3
PP4
joint
3
GTEx
Spleen
PRPS1P2
0.18
0.02
lasso
4
0.04
3.9e-02
4.5
5.4
6.6e-08
-0.56
0.08
0.21
TRUE
1
GTEx
Artery Tibial
GAPVD1
0.11
0.16
enet
19
0.16
6.4e-13
-5.2
-5.3
9.7e-08
0.94
0.02
0.97
FALSE
2
GTEx
Brain Cerebellum
PRPS1P2
0.09
0.08
enet
16
0.04
2.8e-02
-4.9
5.2
2.2e-07
-0.80
0.06
0.71
FALSE