Best TWAS P=6.61e-08 · Best GWAS P=2.25e-07 conditioned to 0.00944
| # | Study | Tissue | Gene | h2 | eQTL R2 | model | # weights | model R2 | model R2 P | eQTL GWAS Z | TWAS Z | TWAS P | Top SNP corr | PP3 | PP4 | joint |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | GTEx | Artery Tibial | GAPVD1 | 0.11 | 0.16 | enet | 19 | 0.16 | 6.4e-13 | -5.2 | -5.3 | 9.7e-08 | 0.94 | 0.02 | 0.97 | FALSE |
| 2 | GTEx | Brain Cerebellum | PRPS1P2 | 0.09 | 0.08 | enet | 16 | 0.04 | 2.8e-02 | -4.9 | 5.2 | 2.2e-07 | -0.80 | 0.06 | 0.71 | FALSE |
| 3 | GTEx | Spleen | PRPS1P2 | 0.18 | 0.02 | lasso | 4 | 0.04 | 3.9e-02 | 4.5 | 5.4 | 6.6e-08 | -0.56 | 0.08 | 0.21 | TRUE |