TWAS
hub
About
Usage
Models
Genes
Traits
[Hub]/) :
Traits
:
Past tobacco smoking
:
←
→
chr17:1,517,914-2,918,626
Best TWAS P=1.42e-07 · Best GWAS P=5.19e-07 conditioned to 1
1.6M
1.8M
2M
2.2M
2.4M
2.6M
2.8M
3M
0
1
2
3
4
5
6
physical position
-log10 P
Marginal
▼
Associated models
#
Study
Tissue
Gene
h2
eQTL R2
model
# weights
model R2
model R2 P
eQTL GWAS Z
TWAS Z
TWAS P
Top SNP corr
PP3
PP4
joint
1
GTEx
Heart Left Ventricle
SRR
0.15
0.16
lasso
3
0.13
2.9e-07
-5
5.3
1.4e-07
-1.00
0
0.99
TRUE
2
The Cancer Genome Atlas
Bladder Urothelial Carcinoma
SRR
0.11
0.09
lasso
4
0.10
6.8e-09
-5
5.1
2.8e-07
-0.95
0
0.99
FALSE