Best TWAS P=8.33e-08 · Best GWAS P=6.24e-06 conditioned to 0.23
| # | Study | Tissue | Gene | h2 | eQTL R2 | model | # weights | model R2 | model R2 P | eQTL GWAS Z | TWAS Z | TWAS P | Top SNP corr | PP3 | PP4 | joint |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | The Cancer Genome Atlas | Colon Adenocarcinoma | TMEM136 | 0.05 | 0.01 | blup | 44 | 0.03 | 0.00724 | -4.3 | -5.4 | 8.3e-08 | 0.68 | 0.00 | 0.09 | TRUE |
| 2 | The Cancer Genome Atlas | Testicular Germ Cell Tumors | TMEM136 | 0.14 | 0.00 | blup | 45 | 0.10 | 0.00022 | -4.3 | -5.2 | 1.9e-07 | 0.71 | 0.00 | 0.17 | FALSE |
| 3 | The Cancer Genome Atlas | Thyroid Carcinoma | TMEM136 | 0.03 | 0.03 | enet | 8 | 0.02 | 0.00354 | -4.2 | -5.2 | 2.4e-07 | 0.89 | 0.01 | 0.70 | FALSE |