TWAS
hub
About
Usage
Models
Genes
Traits
[Hub]/) :
Traits
:
Breastfed as a baby
:
←
chr11:119,947,402-120,446,830
Best TWAS P=8.33e-08 · Best GWAS P=6.24e-06 conditioned to 0.23
120M
120.1M
120.2M
120.3M
120.4M
0
1
2
3
4
5
physical position
-log10 P
Marginal
▼
Associated models
#
Study
Tissue
Gene
h2
eQTL R2
model
# weights
model R2
model R2 P
eQTL GWAS Z
TWAS Z
TWAS P
Top SNP corr
PP3
PP4
joint
1
The Cancer Genome Atlas
Colon Adenocarcinoma
TMEM136
0.05
0.01
blup
44
0.03
0.00724
-4.3
-5.4
8.3e-08
0.68
0.00
0.09
TRUE
2
The Cancer Genome Atlas
Testicular Germ Cell Tumors
TMEM136
0.14
0.00
blup
45
0.10
0.00022
-4.3
-5.2
1.9e-07
0.71
0.00
0.17
FALSE
3
The Cancer Genome Atlas
Thyroid Carcinoma
TMEM136
0.03
0.03
enet
8
0.02
0.00354
-4.2
-5.2
2.4e-07
0.89
0.01
0.70
FALSE