TWAS
hub
About
Usage
Models
Genes
Traits
[Hub]/) :
Traits
:
Comparative body size at age 10
:
→
chr1:959,842-2,404,256
Best TWAS P=4.01e-08 · Best GWAS P=2.23e-07 conditioned to 0.142
1M
1.2M
1.4M
1.6M
1.8M
2M
2.2M
2.4M
0
2
4
6
physical position
-log10 P
Marginal
▼
Associated models
#
Study
Tissue
Gene
h2
eQTL R2
model
# weights
model R2
model R2 P
eQTL GWAS Z
TWAS Z
TWAS P
Top SNP corr
PP3
PP4
joint
2
GTEx
Muscle Skeletal
NADK
0.06
0.00
enet
9
0.00
1.3e-01
-4.7
-5.5
4.1e-08
-0.77
0.04
0.85
TRUE
3
The Cancer Genome Atlas
Kidney Renal Clear Cell Carcinoma
SLC35E2
0.03
0.00
blup
34
0.01
5.3e-02
-4.7
5.5
4.0e-08
0.81
0.01
0.58
FALSE
1
CommonMind
Brain Pre-frontal Cortex
SLC35E2
0.35
0.15
enet
24
0.17
1.0e-20
-4.6
5.2
1.9e-07
0.71
0.12
0.86
FALSE