TWAS
hub
About
Usage
Models
Genes
Traits
[Hub]/) :
Traits
:
Comparative body size at age 10
:
←
→
chr18:20,393,480-21,863,589
Best TWAS P=1.76e-08 · Best GWAS P=2.68e-07 conditioned to 0.777
20.4M
20.6M
20.8M
21M
21.2M
21.4M
21.6M
21.8M
0
2
4
6
physical position
-log10 P
Marginal
▼
Associated models
#
Study
Tissue
Gene
h2
eQTL R2
model
# weights
model R2
model R2 P
eQTL GWAS Z
TWAS Z
TWAS P
Top SNP corr
PP3
PP4
joint
2
GTEx
Nerve Tibial
C18orf8
0.16
0.07
enet
21
0.09
3.9e-07
-4.5
-5.6
1.8e-08
0.89
0.02
0.97
TRUE
3
GTEx
Thyroid
NPC1
0.20
0.10
enet
25
0.13
2.3e-10
-5.1
-5.5
3.2e-08
0.90
0.01
0.98
FALSE
1
GTEx
Artery Tibial
NPC1
0.26
0.07
enet
31
0.11
3.7e-09
4.3
-5.4
6.4e-08
0.80
0.06
0.92
FALSE
4
The Cancer Genome Atlas
Thyroid Carcinoma
NPC1
0.04
0.03
blup
70
0.05
9.4e-06
-4.9
-5.1
2.9e-07
0.88
0.03
0.96
FALSE