TWAS
hub
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Usage
Models
Genes
Traits
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Traits
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Comparative body size at age 10
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chr19:48,918,157-49,452,462
Best TWAS P=1.19e-07 · Best GWAS P=2.1e-07 conditioned to 0.281
48.9M
49M
49.1M
49.2M
49.3M
49.4M
0
2
4
6
physical position
-log10 P
Marginal
▼
Associated models
#
Study
Tissue
Gene
h2
eQTL R2
model
# weights
model R2
model R2 P
eQTL GWAS Z
TWAS Z
TWAS P
Top SNP corr
PP3
PP4
joint
3
The Cancer Genome Atlas
Thyroid Carcinoma
NTN5
0.11
0.07
blup
43
0.09
2.6e-09
-4.6
-5.3
1.2e-07
0.89
0.02
0.98
TRUE
2
The Cancer Genome Atlas
Testicular Germ Cell Tumors
FUT2
0.22
0.09
lasso
8
0.13
3.0e-05
4.4
5.3
1.4e-07
-0.80
0.01
0.98
FALSE
1
The Cancer Genome Atlas
Pancreatic Adenocarcinoma
FUT2
0.08
0.12
lasso
4
0.11
2.5e-05
-5.1
5.1
3.0e-07
-1.00
0.01
0.98
FALSE