Best TWAS P=1.19e-07 · Best GWAS P=2.1e-07 conditioned to 0.281
| # | Study | Tissue | Gene | h2 | eQTL R2 | model | # weights | model R2 | model R2 P | eQTL GWAS Z | TWAS Z | TWAS P | Top SNP corr | PP3 | PP4 | joint |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | The Cancer Genome Atlas | Pancreatic Adenocarcinoma | FUT2 | 0.08 | 0.12 | lasso | 4 | 0.11 | 2.5e-05 | -5.1 | 5.1 | 3.0e-07 | -1.00 | 0.01 | 0.98 | FALSE |
| 2 | The Cancer Genome Atlas | Testicular Germ Cell Tumors | FUT2 | 0.22 | 0.09 | lasso | 8 | 0.13 | 3.0e-05 | 4.4 | 5.3 | 1.4e-07 | -0.80 | 0.01 | 0.98 | FALSE |
| 3 | The Cancer Genome Atlas | Thyroid Carcinoma | NTN5 | 0.11 | 0.07 | blup | 43 | 0.09 | 2.6e-09 | -4.6 | -5.3 | 1.2e-07 | 0.89 | 0.02 | 0.98 | TRUE |