TWAS
hub
About
Usage
Models
Genes
Traits
[Hub]/) :
Traits
:
Comparative height size at age 10
:
←
→
chr19:39,186,950-39,768,216
Best TWAS P=8.56e-12 · Best GWAS P=1.95e-07 conditioned to 0.035
39.2M
39.3M
39.4M
39.5M
39.6M
39.7M
39.8M
0
2
4
6
physical position
-log10 P
Marginal
▼
Associated models
#
Study
Tissue
Gene
h2
eQTL R2
model
# weights
model R2
model R2 P
eQTL GWAS Z
TWAS Z
TWAS P
Top SNP corr
PP3
PP4
joint
1
The Cancer Genome Atlas
Head and Neck Squamous Cell Carcinoma
FBXO17
0.05
0.02
blup
54
0.03
2.5e-04
5.1
6.8
8.6e-12
0.49
0.01
0.86
TRUE
2
The Cancer Genome Atlas
Kidney Renal Clear Cell Carcinoma
FBXO27
0.04
0.05
enet
8
0.06
1.2e-07
-4.8
5.2
2.1e-07
0.86
0.03
0.96
FALSE