[Hub]/) : Traits : Comparative height size at age 10 : ← →

chr19:41,165,252-42,626,207

Best TWAS P=9.17e-20 · Best GWAS P=2.59e-18 conditioned to 0.238

Associated models

#	Study	Tissue	Gene	h2	eQTL R2	model	# weights	model R2	model R2 P	eQTL GWAS Z	TWAS Z	TWAS P	Top SNP corr	PP3	PP4	joint
46	The Cancer Genome Atlas	Pheochromocytoma and Paraganglioma	ATP5SL	0.23	0.05	blup	18	0.05	4.5e-03	8.7	-9.1	9.2e-20	-0.90	0.01	0.85	TRUE
9	GTEx	Brain Cerebellum	CTC-435M10.6	0.18	0.01	lasso	4	0.03	5.1e-02	8.6	8.8	1.0e-18	0.88	0.02	0.87	FALSE
23	GTEx	Muscle Skeletal	EXOSC5	0.07	0.03	enet	6	0.03	4.1e-04	8.6	8.8	1.1e-18	0.98	0.02	0.98	FALSE
7	GTEx	Brain Cerebellar Hemisphere	CTC-435M10.6	0.29	0.20	lasso	4	0.18	2.6e-05	8.7	8.8	1.8e-18	0.99	0.02	0.96	FALSE
47	The Cancer Genome Atlas	Prostate Adenocarcinoma	ATP5SL	0.03	0.03	blup	18	0.03	4.1e-04	8.7	-8.7	2.3e-18	-0.99	0.01	0.93	FALSE
26	GTEx	Nerve Tibial	CTC-435M10.6	0.18	0.15	lasso	6	0.14	5.5e-10	8.5	8.7	2.9e-18	0.98	0.01	0.99	FALSE
39	The Cancer Genome Atlas	Bladder Urothelial Carcinoma	BCKDHA	0.02	0.02	lasso	2	0.02	1.5e-02	8.7	-8.7	3.3e-18	-0.99	0.01	0.82	FALSE
8	GTEx	Brain Cerebellum	B3GNT8	0.28	0.23	lasso	5	0.21	9.2e-07	8.7	8.7	4.4e-18	0.99	0.02	0.98	FALSE
30	GTEx	Testis	EXOSC5	0.31	0.33	enet	10	0.33	1.8e-15	8.6	8.6	5.6e-18	0.99	0.02	0.98	FALSE
43	The Cancer Genome Atlas	Brain Lower Grade Glioma	ATP5SL	0.02	0.03	enet	4	0.02	7.0e-04	8.6	-8.6	7.8e-18	-0.99	0.02	0.92	FALSE
5	GTEx	Artery Aorta	CTC-435M10.6	0.16	0.14	lasso	3	0.13	1.3e-07	8.6	8.5	1.2e-17	0.99	0.02	0.98	FALSE
10	GTEx	Brain Frontal Cortex BA9	ATP5SL	0.28	0.15	lasso	3	0.10	1.0e-03	8.6	-8.5	1.3e-17	-0.98	0.02	0.94	FALSE
38	The Cancer Genome Atlas	Bladder Urothelial Carcinoma	B3GNT8	0.03	0.04	blup	20	0.04	3.2e-04	8.6	8.5	1.6e-17	0.99	0.01	0.96	FALSE
49	The Cancer Genome Atlas	Thyroid Carcinoma	ATP5SL	0.02	0.02	blup	18	0.02	3.5e-03	8.7	-8.5	2.1e-17	-0.99	0.01	0.79	FALSE
28	GTEx	Stomach	B3GNT8	0.22	0.14	lasso	7	0.12	1.4e-06	8.6	8.5	2.4e-17	0.97	0.02	0.98	FALSE
13	GTEx	Cells Transformed fibroblasts	CTC-435M10.6	0.18	0.16	lasso	2	0.15	4.2e-11	8.4	8.5	2.9e-17	0.96	0.02	0.98	FALSE
6	GTEx	Brain Cerebellar Hemisphere	B3GNT8	0.38	0.30	lasso	5	0.23	1.1e-06	8.7	8.4	4.1e-17	0.97	0.01	0.98	FALSE
1	CommonMind	Brain Pre-frontal Cortex	ATP5SL	0.34	0.48	bslmm	365	0.48	1.5e-65	8.6	-8.4	4.5e-17	-0.99	0.01	0.99	FALSE
22	GTEx	Lung	CTC-435M10.6	0.13	0.11	lasso	3	0.10	3.3e-08	8.4	8.4	5.0e-17	0.98	0.02	0.98	FALSE
18	GTEx	Esophagus Muscularis	CTC-435M10.6	0.12	0.12	lasso	2	0.10	1.4e-06	8.5	8.4	6.7e-17	0.95	0.02	0.98	FALSE
3	GTEx	Artery Aorta	ATP5SL	0.14	0.00	lasso	2	0.01	1.6e-01	8.4	-8.3	7.2e-17	-0.98	0.03	0.59	FALSE
12	GTEx	Cells Transformed fibroblasts	B3GNT8	0.10	0.02	lasso	2	0.03	2.0e-03	8.4	8.3	9.8e-17	0.98	0.03	0.97	FALSE
40	The Cancer Genome Atlas	Breast Invasive Carcinoma	B3GNT8	0.04	0.07	blup	20	0.07	1.2e-13	8.4	8.3	1.1e-16	0.98	0.02	0.98	FALSE
44	The Cancer Genome Atlas	Brain Lower Grade Glioma	EXOSC5	0.04	0.03	lasso	2	0.02	5.8e-03	8.7	8.3	1.5e-16	0.95	0.01	0.74	FALSE
31	GTEx	Thyroid	EXOSC5	0.14	0.08	lasso	5	0.05	8.4e-05	8.4	8.2	1.8e-16	0.97	0.03	0.96	FALSE
41	The Cancer Genome Atlas	Colon Adenocarcinoma	B3GNT8	0.09	0.13	blup	20	0.11	5.2e-07	8.5	8.2	1.8e-16	0.98	0.02	0.98	FALSE
14	GTEx	Colon Transverse	B3GNT8	0.21	0.17	lasso	4	0.18	6.7e-09	8.6	8.2	2.4e-16	0.97	0.02	0.98	FALSE
34	YFS	Blood	ATP5SL	0.06	0.02	lasso	12	0.03	1.1e-09	8.6	8.1	7.4e-16	0.85	0.01	0.99	FALSE
29	GTEx	Stomach	CTC-435M10.6	0.23	0.14	lasso	11	0.13	1.0e-06	8.5	7.9	2.6e-15	0.94	0.02	0.98	FALSE
42	The Cancer Genome Atlas	Kidney Renal Clear Cell Carcinoma	ATP5SL	0.04	0.03	enet	12	0.03	1.6e-04	8.7	-7.9	2.8e-15	-0.92	0.01	0.98	FALSE
4	GTEx	Artery Aorta	B3GNT8	0.14	0.09	lasso	2	0.08	2.6e-05	8.7	7.9	3.1e-15	0.97	0.02	0.98	FALSE
51	The Cancer Genome Atlas	Thyroid Carcinoma	EXOSC5	0.02	0.01	blup	31	0.03	4.5e-04	8.4	7.8	4.6e-15	0.96	0.02	0.93	FALSE
50	The Cancer Genome Atlas	Thyroid Carcinoma	B3GNT8	0.10	0.12	lasso	3	0.11	1.3e-10	8.6	7.8	7.5e-15	0.97	0.01	0.99	FALSE
25	GTEx	Nerve Tibial	B3GNT8	0.22	0.17	enet	12	0.20	6.6e-14	8.5	7.6	4.0e-14	0.96	0.02	0.98	FALSE
32	GTEx	Thyroid	B3GNT8	0.09	0.04	enet	17	0.03	1.4e-03	8.7	7.6	4.2e-14	0.84	0.01	0.96	FALSE
15	GTEx	Colon Transverse	CTC-435M10.6	0.26	0.19	enet	19	0.22	5.8e-11	8.4	7.5	5.6e-14	0.91	0.02	0.98	FALSE
2	CommonMind	Brain Pre-frontal Cortex	BCKDHA	0.12	0.08	lasso	6	0.10	8.9e-13	8.6	-7.4	1.1e-13	-0.95	0.02	0.98	FALSE
33	GTEx	Thyroid	CTC-435M10.6	0.07	0.03	lasso	2	0.04	7.9e-04	8.7	7.3	2.3e-13	0.89	0.02	0.97	FALSE
36	YFS	Blood	BCKDHA	0.08	0.05	enet	27	0.06	1.9e-18	8.6	-7.2	5.6e-13	-0.89	0.01	0.99	FALSE
48	The Cancer Genome Atlas	Rectum Adenocarcinoma	B3GNT8	0.39	0.08	blup	20	0.07	1.1e-02	8.7	7.2	5.6e-13	0.85	0.00	0.32	FALSE
24	GTEx	Nerve Tibial	B9D2	0.13	0.08	lasso	4	0.06	2.9e-05	6.4	7.1	9.8e-13	0.73	0.07	0.86	FALSE
16	GTEx	Esophagus Gastroesophageal Junction	CTC-435M10.6	0.23	0.10	enet	17	0.10	1.7e-04	8.7	7.1	1.1e-12	0.87	0.02	0.96	FALSE
27	GTEx	Skin Sun Exposed Lower leg	B3GNT8	0.11	0.04	lasso	6	0.05	1.1e-04	-4.3	6.8	8.5e-12	0.92	0.02	0.98	FALSE
45	The Cancer Genome Atlas	Pancreatic Adenocarcinoma	B3GNT8	0.15	0.12	blup	20	0.12	1.3e-05	-4.3	6.7	2.7e-11	0.90	0.04	0.93	FALSE
17	GTEx	Esophagus Muscularis	B3GNT8	0.14	0.10	lasso	2	0.16	7.5e-10	-4.3	6.6	3.8e-11	0.90	0.03	0.97	FALSE
19	GTEx	Heart Atrial Appendage	TMEM91	0.12	0.05	lasso	4	0.08	1.7e-04	7.0	6.4	1.9e-10	0.58	0.05	0.69	FALSE
21	GTEx	Heart Left Ventricle	CTC-435M10.6	0.18	0.02	lasso	4	0.06	4.8e-04	8.6	6.3	3.9e-10	0.83	0.02	0.95	FALSE
35	YFS	Blood	B9D2	0.03	0.02	enet	16	0.02	5.6e-07	7.0	6.1	1.1e-09	0.57	0.73	0.20	FALSE
11	GTEx	Cells Transformed fibroblasts	TMEM91	0.08	0.00	enet	31	0.01	7.4e-02	2.8	5.5	3.7e-08	0.56	0.02	0.81	FALSE
20	GTEx	Heart Left Ventricle	B3GNT8	0.27	0.04	lasso	7	0.06	3.9e-04	-4.3	5.4	5.6e-08	0.77	0.03	0.97	FALSE
37	YFS	Blood	TMEM91	0.50	0.05	enet	85	0.25	5.4e-82	3.0	5.2	1.8e-07	0.28	1.00	0.00	FALSE