Best TWAS P=2.59e-08 · Best GWAS P=5.5e-07 conditioned to 0.544
# | Study | Tissue | Gene | h2 | eQTL R2 | model | # weights | model R2 | model R2 P | eQTL GWAS Z | TWAS Z | TWAS P | Top SNP corr | PP3 | PP4 | joint |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
1 | The Cancer Genome Atlas | Bladder Urothelial Carcinoma | ORC4L | 0.07 | 0.04 | blup | 37 | 0.03 | 0.00061 | -4.9 | 5.5 | 3.4e-08 | -0.94 | 0.00 | 0.86 | FALSE |
2 | The Cancer Genome Atlas | Brain Lower Grade Glioma | ORC4L | 0.06 | 0.01 | blup | 37 | 0.03 | 0.00016 | 4.5 | 5.6 | 2.6e-08 | -0.84 | 0.01 | 0.93 | TRUE |